Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | KARP_00486 | Not Available | Negative | 444619 - 445689 | 40456.3 |
| hydrolase | KARP_00487 | O67012 | Negative | 445811 - 446398 | 22822.0 |
| atp-binding protein | KARP_00488 | P0AEC7 | Negative | 446440 - 446934 | 18461.6 |
| atp-binding protein | KARP_00489 | Q8D5Z6 | Negative | 446953 - 447888 | 35813.3 |
| atp-binding protein | KARP_00490 | Q5A599 | Negative | 447905 - 448483 | 21799.4 |
| histidine kinase | KARP_00491 | Q54YZ9 | Negative | 448613 - 449314 | 26302.8 |
| atp-binding protein | KARP_00492 | Not Available | Negative | 449379 - 449657 | 10422.7 |
| dna methyltransferase | KARP_00493 | Q58015 | Positive | 450024 - 450833 | 31736.8 |
| membrane protein | KARP_00494 | Not Available | Negative | 450837 - 451385 | 20241.2 |
| ankyrin | KARP_00495 | G3I6Z6 | Negative | 451433 - 452077 | 24003.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
