Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | KARP_00476 | P33790 | Positive | 429143 - 431038 | 69863.3 |
| conjugal transfer protein trag | KARP_00477 | Not Available | Positive | 431096 - 431776 | 25845.8 |
| tpr repeat-containing protein 03 | KARP_00478 | Not Available | Positive | 431789 - 432928 | 43497.2 |
| conjugal transfer protein | KARP_00479 | P09130 | Positive | 432934 - 434688 | 66455.9 |
| transposase | KARP_00480 | B7NGZ6 | Negative | 434698 - 435633 | 36662.6 |
| conjugal transfer protein trai | KARP_00481 | Not Available | Negative | 435685 - 436236 | 20173.2 |
| conjugal transfer protein trai | KARP_00482 | Q44363 | Negative | 436250 - 438358 | 78604.5 |
| conjugal transfer protein traa | KARP_00483 | Q44349 | Negative | 438622 - 441489 | 108799.0 |
| hnh endonuclease | KARP_00484 | P19593 | Positive | 442171 - 443886 | 66819.4 |
| conjugative transfer protein | KARP_00485 | Not Available | Positive | 444096 - 444551 | 17507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
