Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | KARP_00466 | P41067 | Positive | 419034 - 420362 | 49140.2 |
| uncharacterised protein | KARP_00467 | Not Available | Positive | 420362 - 420682 | 12261.4 |
| conjugal transfer protein trac | KARP_00468 | P18004 | Positive | 420663 - 423155 | 92906.7 |
| type-f conjugative transfer system protein traw | KARP_00469 | P18472 | Positive | 423152 - 423811 | 24502.1 |
| uncharacterised protein | KARP_00470 | Not Available | Positive | 423902 - 424075 | 6582.16 |
| conjugal transfer protein | KARP_00471 | P18471 | Positive | 424109 - 425053 | 34634.4 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_00472 | P18473 | Positive | 425076 - 425459 | 14359.7 |
| conjugal transfer protein tran | KARP_00473 | P24082 | Positive | 425456 - 427150 | 64658.9 |
| conjugal transfer protein | KARP_00474 | Not Available | Positive | 427147 - 427845 | 26749.5 |
| conjugal transfer protein trah | KARP_00475 | P15069 | Positive | 427842 - 429143 | 48263.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
