Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase isot6 | KARP_00446 | Q00462 | Positive | 399823 - 400197 | 14611.1 |
| Trna-asn | Not Available | Not Available | Positive | 400628 - 400702 | Not Available |
| translation initiation factor if-1 | KARP_00448 | A8ESW4 | Positive | 400801 - 401025 | 8493.63 |
| septum formation inhibitor maf | KARP_00449 | A5CCC1 | Positive | 401069 - 401665 | 22143.4 |
| transcriptional regulator | KARP_00450 | B3CTY9 | Positive | 401792 - 402541 | 28095.2 |
| dna gyrase subunit a | KARP_00451 | Q4UKM1 | Positive | 402640 - 405357 | 101320.0 |
| serine hydroxymethyltransferase | KARP_00452 | A5CCC4 | Positive | 405391 - 406671 | 46972.7 |
| uncharacterised protein | KARP_00453 | Not Available | Negative | 407424 - 409916 | 93405.7 |
| ribonuclease p | KARP_00454 | A8GVL0 | Negative | 410155 - 410694 | 20690.6 |
| 50s ribosomal protein l34 | KARP_00455 | A5CCC8 | Negative | 410695 - 410877 | 7251.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
