Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00426 | Not Available | Negative | 388744 - 389001 | 10064.4 |
| reverse transcriptase | KARP_00427 | Not Available | Negative | 389089 - 389307 | 8340.26 |
| ankyrin repeat-containing protein 19 | KARP_00428 | Q9H2K2 | Negative | 389665 - 390528 | 32396.2 |
| ankyrin repeat-containing protein | KARP_00429 | Not Available | Negative | 390546 - 390710 | 6279.8 |
| uncharacterised protein | KARP_00430 | Not Available | Negative | 390942 - 391088 | 5662.09 |
| conjugal transfer protein trai | KARP_00431 | Not Available | Negative | 391137 - 391523 | 14205.8 |
| uncharacterised protein | KARP_00432 | Not Available | Positive | 391647 - 392315 | 25090.5 |
| conjugal transfer protein traa | KARP_00433 | Not Available | Negative | 392531 - 392674 | 5259.8 |
| conjugal transfer protein traa | KARP_00434 | Q44349 | Negative | 392668 - 392982 | 11668.4 |
| conjugal transfer protein traa | KARP_00435 | Not Available | Negative | 392954 - 393196 | 8891.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
