Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | KARP_00386 | Q44363 | Negative | 350833 - 352932 | 78241.3 |
| conjugal transfer protein traa | KARP_00387 | Not Available | Negative | 353198 - 353965 | 29136.8 |
| conjugal transfer protein traa | KARP_00388 | Q44363 | Negative | 354022 - 356034 | 76956.2 |
| conjugative transfer protein | KARP_00389 | Not Available | Positive | 356313 - 356768 | 17484.4 |
| uncharacterised protein | KARP_00390 | Not Available | Negative | 356827 - 357627 | 29144.8 |
| (p)pgpp hydrolase | KARP_00391 | Q2YN11 | Negative | 357703 - 358278 | 22699.1 |
| atp-binding protein | KARP_00392 | Q8D5Z6 | Negative | 358379 - 359236 | 33289.6 |
| atp-binding protein | KARP_00393 | P23545 | Negative | 359211 - 359987 | 29915.9 |
| dna methyltransferase | KARP_00394 | P04043 | Positive | 360354 - 361112 | 29770.7 |
| membrane protein | KARP_00395 | Not Available | Negative | 361168 - 361719 | 20296.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
