Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | KARP_00366 | Not Available | Positive | 334909 - 335181 | 9432.48 |
| uncharacterised protein | KARP_00367 | Not Available | Positive | 335310 - 335648 | 12976.4 |
| nadp-dependent oxidoreductase | KARP_00368 | P40783 | Negative | 336625 - 337770 | 42786.5 |
| cytochrome c biogenesis protein ccme | KARP_00369 | Q9ZCW6 | Positive | 338070 - 338465 | 14979.5 |
| uncharacterised protein | KARP_00370 | Q9ZD57 | Positive | 338496 - 339410 | 34883.5 |
| holliday junction resolvase ruvx | KARP_00371 | B3CU37 | Positive | 339407 - 339880 | 17483.6 |
| single-stranded-dna-specific exonuclease recj | KARP_00372 | O32044 | Positive | 339894 - 341654 | 65007.8 |
| organic solvent abc transporter atp-binding protein | KARP_00373 | P30769 | Negative | 341981 - 342736 | 28045.5 |
| abc transporter permease | KARP_00374 | Q4UNC7 | Negative | 342765 - 343556 | 28702.9 |
| ribosomal rna small subunit methyltransferase e | KARP_00375 | Q92J59 | Negative | 343669 - 344460 | 29792.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
