Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | KARP_00327 | Q47421 | Positive | 306786 - 308066 | 47346.2 |
| uncharacterised protein | KARP_00328 | Q92JM8 | Positive | 308267 - 308989 | 27593.2 |
| uncharacterised protein | KARP_00329 | Not Available | Positive | 309081 - 310328 | 47059.6 |
| polyribonucleotide nucleotidyltransferase | KARP_00330 | B3CTX1 | Negative | 310460 - 312670 | 81491.4 |
| 30s ribosomal protein s15 | KARP_00331 | B3CTX2 | Negative | 313004 - 313273 | 10423.0 |
| trna pseudouridine(55) synthase | KARP_00332 | A8GWV0 | Negative | 313297 - 314205 | 33500.8 |
| uncharacterised protein | KARP_00362 | Not Available | Positive | 333637 - 333960 | 11807.3 |
| conjugal transfer protein trae | KARP_00363 | Not Available | Positive | 333960 - 334379 | 16134.7 |
| conjugative transfer protein | KARP_00364 | Not Available | Positive | 334360 - 334512 | 5739.05 |
| uncharacterised protein | KARP_00365 | Not Available | Positive | 334509 - 334835 | 12299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
