Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | KARP_00317 | Q3T4F3 | Negative | 295685 - 297349 | 62855.4 |
| succinyl-coa synthetase subunit alpha | KARP_00318 | Q1RH56 | Negative | 297430 - 298308 | 30160.8 |
| succinyl-coa ligase subunit beta | KARP_00319 | B3CTW0 | Negative | 298323 - 299483 | 42125.4 |
| 2-polyprenyl-6-methoxyphenol 4-hydroxylase | KARP_00320 | Q2RMZ4 | Negative | 299540 - 300802 | 47718.5 |
| Trna-gln | Not Available | Not Available | Positive | 300983 - 301057 | Not Available |
| uncharacterised protein | KARP_00322 | Not Available | Negative | 301137 - 301724 | 22162.9 |
| isoleucine--trna ligase | KARP_00323 | Q4UMD8 | Negative | 301852 - 305055 | 123435.0 |
| uncharacterised protein | KARP_00324 | O75208 | Negative | 305092 - 305697 | 23403.6 |
| 30s ribosomal protein s21 | KARP_00325 | B3CTW5 | Positive | 305868 - 306074 | 8444.56 |
| dna polymerase iii subunit chi | KARP_00326 | Q9ZC94 | Negative | 306103 - 306612 | 19922.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
