Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 287217 - 287293 | Not Available |
| lysine--trna ligase | KARP_00308 | A8GVK6 | Negative | 287475 - 289055 | 60504.2 |
| disulfide bond formation protein b | KARP_00309 | Q9ZDF9 | Positive | 289194 - 289742 | 21000.6 |
| ubiquinone biosynthesis protein ubib | KARP_00310 | Q99807 | Positive | 289705 - 290250 | 21129.9 |
| phosphatidylserine decarboxylase | KARP_00311 | C4K0V0 | Positive | 290327 - 291019 | 25291.0 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | KARP_00312 | Q9ZBM2 | Positive | 291071 - 291844 | 28868.7 |
| sodium:proton antiporter | KARP_00313 | Not Available | Positive | 291894 - 292379 | 18508.1 |
| uncharacterised protein | KARP_00314 | Not Available | Positive | 292376 - 292630 | 9781.54 |
| uncharacterised protein | KARP_00315 | Q1RIZ9 | Positive | 292659 - 295493 | 108201.0 |
| uncharacterised protein | KARP_00316 | Not Available | Negative | 295402 - 295599 | 7763.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
