Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trai | KARP_00297 | Not Available | Positive | 277187 - 279610 | 89997.0 |
| transposase | KARP_00298 | B7NGZ6 | Positive | 279662 - 280681 | 39265.7 |
| conjugal transfer protein | KARP_00299 | P09130 | Negative | 280691 - 280900 | 8022.17 |
| conjugative transfer protein | KARP_00300 | P09130 | Negative | 280985 - 281221 | 8749.56 |
| uncharacterised protein | KARP_00301 | Not Available | Positive | 281903 - 282928 | 38412.5 |
| is630 family transposase | KARP_00302 | Not Available | Positive | 283097 - 283363 | 10190.6 |
| uncharacterised protein | KARP_00303 | Not Available | Positive | 283455 - 284036 | 20719.8 |
| peptidylprolyl isomerase | KARP_00304 | Q8K987 | Negative | 284073 - 285530 | 56077.7 |
| triose-phosphate isomerase | KARP_00305 | B3CTU9 | Positive | 285707 - 286456 | 27716.6 |
| preprotein translocase subunit secg | KARP_00306 | Q68XV2 | Positive | 286462 - 286755 | 10342.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
