Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00287 | Not Available | Negative | 262127 - 264910 | 105591.0 |
| ferredoxin--nadp(+) reductase | KARP_00288 | B3CTT3 | Positive | 265109 - 266125 | 36958.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | KARP_00289 | B3CTT4 | Positive | 266122 - 267027 | 32928.8 |
| uncharacterised protein | KARP_00290 | Q9ZDE9 | Negative | 266962 - 268347 | 53034.5 |
| dna topoisomerase i | KARP_00291 | Q1RIM1 | Negative | 268347 - 270713 | 89619.9 |
| malate dehydrogenase | KARP_00292 | Q2RV34 | Negative | 270806 - 271762 | 34676.5 |
| ribosome maturation factor rimm | KARP_00293 | A5CF62 | Negative | 271982 - 272476 | 18595.7 |
| uncharacterised protein | KARP_00294 | Not Available | Positive | 272645 - 275176 | 96558.0 |
| methionyl-trna formyltransferase | KARP_00295 | A5CF64 | Negative | 275474 - 276397 | 34228.1 |
| peptide deformylase | KARP_00296 | B3CTU1 | Negative | 276394 - 276939 | 20270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
