Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traa | KARP_00277 | Not Available | Positive | 249864 - 250682 | 31425.0 |
| uncharacterised protein | KARP_00278 | Not Available | Negative | 251135 - 252205 | 40071.8 |
| uncharacterised protein | KARP_00279 | Not Available | Negative | 252681 - 252857 | 6820.28 |
| cytochrome c | KARP_00280 | Q1RHX7 | Negative | 253111 - 253659 | 20166.3 |
| stomatin 2 | KARP_00281 | O60121 | Positive | 253915 - 254874 | 34881.3 |
| atp-binding protein | KARP_00282 | Q4UKB5 | Negative | 256473 - 257489 | 37545.8 |
| hflk protein | KARP_00283 | Q9KV09 | Positive | 257671 - 258726 | 40185.5 |
| protease modulator hflc | KARP_00284 | P44545 | Positive | 258750 - 259616 | 32845.8 |
| type surface antigen 47 (47 kda/htra) | KARP_00285 | O05942 | Positive | 259634 - 261034 | 50747.4 |
| peptidoglycan-associated lipoprotein | KARP_00286 | P0A913 | Positive | 261246 - 261860 | 23244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
