Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer protein | KARP_00257 | P18471 | Negative | 227287 - 227814 | 19484.7 |
| ankyrin repeat-containing protein | KARP_00258 | O90760 | Positive | 228463 - 229452 | 37377.3 |
| conjugal transfer protein trac | KARP_00259 | P18004 | Negative | 229366 - 230316 | 34336.3 |
| aminomethyltransferase | KARP_00260 | Q8CAK1 | Positive | 232367 - 233233 | 32892.4 |
| is630 family transposase | KARP_00261 | Not Available | Negative | 233411 - 233626 | 8674.49 |
| uncharacterised protein | KARP_00262 | Not Available | Positive | 233935 - 235785 | 70203.7 |
| purine nucleoside phosphoramidase | KARP_00263 | Q9ZDL1 | Positive | 236022 - 236393 | 13996.6 |
| aspartate-semialdehyde dehydrogenase | KARP_00264 | Q1RIB3 | Positive | 236453 - 237490 | 38293.0 |
| protoheme ix farnesyltransferase | KARP_00265 | B3CTF6 | Negative | 237630 - 238568 | 34855.7 |
| cytochrome c oxidase subunit i | KARP_00266 | Q92I67 | Negative | 238579 - 240165 | 58145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
