Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | KARP_00187 | P18472 | Positive | 165419 - 166078 | 24553.0 |
| uncharacterised protein | KARP_00188 | Not Available | Positive | 166169 - 166342 | 6582.16 |
| conjugal transfer protein | KARP_00189 | P18471 | Positive | 166376 - 167320 | 34616.4 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_00190 | P18473 | Positive | 167343 - 167726 | 14430.8 |
| conjugal transfer protein tran | KARP_00191 | P24082 | Positive | 167723 - 169417 | 64776.1 |
| ankyrin repeat-containing protein 09 | KARP_00192 | Q38998 | Positive | 169576 - 170106 | 19772.5 |
| is110 family transposase | KARP_00193 | P20665 | Negative | 170144 - 171106 | 36087.2 |
| ankyrin repeat-containing protein 16 | KARP_00194 | Not Available | Positive | 171262 - 172152 | 34466.8 |
| conjugal transfer protein | KARP_00195 | Not Available | Positive | 172347 - 173063 | 27371.2 |
| conjugal transfer protein trah | KARP_00196 | P15069 | Positive | 173060 - 173689 | 22963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
