Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trae | KARP_00177 | Not Available | Positive | 159750 - 160142 | 15008.3 |
| conjugative transfer protein | KARP_00178 | Not Available | Positive | 160151 - 160303 | 5860.25 |
| uncharacterised protein | KARP_00179 | Not Available | Positive | 160300 - 160776 | 17977.8 |
| uncharacterised protein | KARP_00180 | Not Available | Positive | 160921 - 161250 | 12041.0 |
| conjugal transfer protein | KARP_00181 | Not Available | Positive | 161293 - 161877 | 22371.2 |
| conjugal transfer protein | KARP_00182 | P41067 | Positive | 162068 - 162619 | 19783.6 |
| uncharacterised protein | KARP_00183 | Not Available | Positive | 162619 - 162948 | 12541.7 |
| conjugal transfer protein trac | KARP_00184 | Not Available | Positive | 162929 - 163216 | 10858.6 |
| conjugal transfer protein trac | KARP_00185 | Not Available | Positive | 163253 - 163801 | 20955.1 |
| conjugal transfer protein trac | KARP_00186 | P18004 | Positive | 163773 - 165422 | 60774.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
