Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer protein | KARP_00167 | Not Available | Negative | 149436 - 149882 | 17157.0 |
| conjugal transfer protein traa | KARP_00168 | Q44363 | Positive | 150169 - 152613 | 93347.1 |
| conjugal transfer protein trai | KARP_00169 | P33655 | Positive | 152732 - 154243 | 56330.8 |
| conjugal transfer protein trai | KARP_00170 | Not Available | Positive | 154257 - 154808 | 20175.2 |
| transposase | KARP_00171 | B7NGZ6 | Positive | 154860 - 155867 | 39148.5 |
| conjugal transfer protein | KARP_00172 | P09130 | Negative | 155877 - 156086 | 8022.17 |
| uncharacterised protein | KARP_00173 | Not Available | Negative | 156791 - 156928 | 5450.6 |
| uncharacterised protein | KARP_00174 | P19593 | Positive | 157340 - 157606 | 10170.4 |
| integrase | KARP_00175 | P32053 | Positive | 158095 - 159294 | 46636.9 |
| uncharacterised protein | KARP_00176 | Not Available | Positive | 159427 - 159750 | 11807.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
