Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpr repeat-containing protein 03 | KARP_00147 | Not Available | Positive | 136785 - 137681 | 34297.6 |
| uncharacterised protein | KARP_00148 | Not Available | Positive | 137791 - 138351 | 21603.7 |
| conjugal transfer protein | KARP_00149 | Not Available | Positive | 138363 - 138605 | 9245.96 |
| transposase | KARP_00150 | B7NGZ6 | Negative | 138563 - 139096 | 20750.8 |
| conjugal transfer protein trai | KARP_00151 | Not Available | Negative | 139148 - 139843 | 25904.9 |
| is5 family transposase isot6 | KARP_00152 | Q00462 | Positive | 140019 - 140456 | 17095.1 |
| is5 family transposase isot6 | KARP_00153 | Q00462 | Positive | 140468 - 140842 | 14659.2 |
| uncharacterised protein | KARP_00154 | Not Available | Positive | 140863 - 141069 | 7214.07 |
| conjugal transfer protein trai | KARP_00155 | Not Available | Negative | 141045 - 141272 | 7825.26 |
| uncharacterised protein | KARP_00156 | Not Available | Positive | 141406 - 141603 | 7670.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
