Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Positive | 173824 - 174258 | 16441.7 |
| hypothetical protein | - | P33790 | Positive | 174258 - 175310 | 39506.2 |
| hypothetical protein | - | Not Available | Positive | 175319 - 176839 | 55663.2 |
| hypothetical protein | - | Not Available | Positive | 176936 - 178081 | 43097.6 |
| hypothetical protein | - | P22708 | Positive | 178087 - 179844 | 66458.9 |
| hypothetical protein | - | B7NGZ6 | Negative | 179854 - 180822 | 37133.9 |
| hypothetical protein | - | Not Available | Negative | 180807 - 181358 | 20165.3 |
| hypothetical protein | - | Q44363 | Negative | 181372 - 183480 | 78785.9 |
| hypothetical protein | - | Q44349 | Negative | 183744 - 185279 | 57719.0 |
| hypothetical protein | - | Q44363 | Negative | 185264 - 186580 | 50382.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
