Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methyltransferase | KARP_00137 | P50179 | Positive | 128186 - 128815 | 24755.3 |
| membrane protein | KARP_00138 | Not Available | Negative | 128819 - 129367 | 20186.1 |
| ankyrin | KARP_00139 | Q810B6 | Negative | 129470 - 130114 | 23927.4 |
| (p)pgpp hydrolase | KARP_00140 | O67012 | Negative | 130126 - 130701 | 22716.3 |
| replicative dna helicase | KARP_00141 | Q4UL62 | Negative | 130937 - 131728 | 29987.9 |
| replicative dna helicase | KARP_00142 | Q1RI04 | Negative | 131909 - 132373 | 17108.8 |
| uncharacterised protein | KARP_00143 | Not Available | Negative | 132382 - 134094 | 67033.3 |
| conjugal transfer protein tran | KARP_00144 | Not Available | Positive | 134655 - 134909 | 9258.34 |
| conjugal transfer protein tran | KARP_00145 | Not Available | Positive | 135177 - 135287 | 4170.07 |
| is110 family transposase | KARP_00146 | P20665 | Positive | 135518 - 136480 | 36087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
