Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00117 | Not Available | Negative | 111941 - 113014 | 40224.1 |
| conjugal transfer protein trai | KARP_00118 | Not Available | Positive | 113176 - 113817 | 23293.5 |
| conjugal transfer protein trai | KARP_00119 | Not Available | Positive | 113831 - 114079 | 8964.66 |
| uncharacterised protein | KARP_00120 | Not Available | Positive | 114646 - 114969 | 11849.4 |
| conjugal transfer protein trae | KARP_00121 | Not Available | Positive | 114969 - 115388 | 16043.6 |
| conjugal transfer protein trae | KARP_00122 | Not Available | Positive | 115369 - 115521 | 5795.12 |
| uncharacterised protein | KARP_00123 | Not Available | Positive | 115518 - 115736 | 8413.31 |
| is5 family transposase isot6 | KARP_00124 | Q00462 | Positive | 115744 - 116202 | 17857.8 |
| is5 family transposase isot6 | KARP_00125 | Q00462 | Positive | 116302 - 116565 | 10227.6 |
| tpr repeat-containing protein 03 | KARP_00126 | Not Available | Negative | 117281 - 118975 | 64399.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
