Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | KARP_00107 | Not Available | Positive | 103476 - 104276 | 30772.9 |
| replicative dna helicase | KARP_00108 | Q68WJ2 | Positive | 104285 - 105721 | 53460.2 |
| ankyrin | KARP_00109 | P46530 | Positive | 105961 - 106590 | 23476.8 |
| membrane protein | KARP_00110 | Not Available | Positive | 106637 - 107140 | 18497.2 |
| atp-binding protein | KARP_00111 | Q5A599 | Positive | 107821 - 108603 | 30349.0 |
| (p)pgpp hydrolase | KARP_00112 | Q2YN11 | Positive | 108704 - 109282 | 22887.5 |
| transposase | KARP_00113 | Not Available | Positive | 109401 - 110291 | 34622.3 |
| conjugal transfer protein trad | KARP_00114 | Not Available | Negative | 110370 - 110540 | 6605.07 |
| conjugal transfer protein traa | KARP_00115 | Q44363 | Positive | 110701 - 111327 | 23726.9 |
| conjugal transfer protein traa | KARP_00116 | Not Available | Positive | 111282 - 111644 | 13599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
