Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trac | KARP_00077 | P18004 | Positive | 68692 - 69228 | 19383.9 |
| ankyrin repeat-containing protein | KARP_00078 | O90760 | Negative | 69142 - 70131 | 37808.9 |
| conjugative transfer protein | KARP_00079 | P18471 | Positive | 70345 - 70872 | 19686.9 |
| type-f conjugative transfer system pilin assembly protein trbc | KARP_00080 | P18473 | Positive | 70895 - 71278 | 14323.7 |
| conjugal transfer protein tran | KARP_00081 | P24082 | Positive | 71275 - 72969 | 64766.0 |
| conjugal transfer protein | KARP_00082 | Not Available | Positive | 72981 - 73280 | 11671.0 |
| conjugal transfer protein | KARP_00083 | Not Available | Positive | 73247 - 73663 | 15869.4 |
| conjugal transfer protein trah | KARP_00084 | P15069 | Positive | 73660 - 74553 | 32659.1 |
| conjugal transfer protein trah | KARP_00085 | Not Available | Positive | 74507 - 74962 | 17245.7 |
| conjugal transfer protein trag | KARP_00086 | P33790 | Positive | 74962 - 76710 | 65069.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
