Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | KARP_00007 | P09817 | Positive | 6596 - 8368 | 67495.8 |
| is5 family transposase isot6 | KARP_00008 | Q00462 | Positive | 8528 - 8830 | 11567.4 |
| uncharacterised protein | KARP_00009 | Q9ZE16 | Positive | 9345 - 11144 | 68499.0 |
| deoxyribodipyrimidine photo-lyase | KARP_00010 | Q89AJ9 | Positive | 11915 - 13204 | 50341.4 |
| thioredoxin-disulfide reductase | KARP_00011 | Q4ULP1 | Negative | 13225 - 14187 | 34902.8 |
| permease | KARP_00012 | Not Available | Negative | 14317 - 15240 | 34235.2 |
| translocation protein tolb | KARP_00013 | B3CUF6 | Negative | 15417 - 16754 | 49458.7 |
| dihydrolipoyl dehydrogenase | KARP_00014 | P31023 | Negative | 17094 - 18521 | 50912.8 |
| sam-dependent methyltransferase | KARP_00015 | Q9ZD84 | Negative | 18613 - 19416 | 30544.4 |
| type surface antigen 22 | KARP_00016 | Not Available | Positive | 19591 - 20199 | 21645.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
