Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Is1381 transposase protein b | KARP_01206 | Q00462 | Negative | 1131795 - 1132169 | 14611.1 |
| is5 family transposase isot6 | KARP_01207 | Not Available | Negative | 1132181 - 1132285 | 4007.86 |
| Is1381 transposase protein a | KARP_01208 | Q00462 | Negative | 1132376 - 1132618 | 9498.74 |
| conjugal transfer protein trai | KARP_01209 | Not Available | Positive | 1132939 - 1133490 | 20173.2 |
| Predicted transposase | KARP_01210 | B7NGZ6 | Positive | 1133542 - 1134102 | 22022.9 |
| Is110-like element is621 family transposase | KARP_01211 | P20665 | Negative | 1134118 - 1135080 | 36044.1 |
| transposase | KARP_01212 | Not Available | Positive | 1135309 - 1135734 | 16392.8 |
| conjugal transfer protein | KARP_01213 | P09130 | Negative | 1135744 - 1136730 | 36826.3 |
| Is1381 transposase protein a | KARP_01214 | Q00462 | Positive | 1136807 - 1137244 | 17072.9 |
| Is1381 transposase protein b | KARP_01215 | Q00462 | Positive | 1137256 - 1137483 | 8776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
