Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attr | Not Available | Not Available | Positive | 329741 - 329752 | Not Available |
| uncharacterised protein | KARP_00359 | Not Available | Positive | 330626 - 330925 | 11660.3 |
| P4 family integrase | KARP_00360 | P10487 | Positive | 332249 - 333142 | 35194.5 |
| integrase | KARP_00361 | Not Available | Positive | 333339 - 333533 | 6936.55 |
| Attr | Not Available | Not Available | Positive | 336427 - 336438 | Not Available |
| Attl | Not Available | Not Available | Positive | 1115114 - 1115126 | Not Available |
| Attl | Not Available | Not Available | Positive | 1115292 - 1115306 | Not Available |
| Transposase | KARP_01203 | Not Available | Negative | 1129469 - 1130419 | 36567.7 |
| Putative guanosine polyphosphate pyrophospho hydrolase/synthetase | KARP_01204 | O67012 | Negative | 1130541 - 1131128 | 22738.0 |
| atp-binding protein | KARP_01205 | P0AEC7 | Negative | 1131170 - 1131664 | 18476.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
