Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Is1381 transposase protein b | KARP_00340 | Q00462 | Positive | 317734 - 318108 | 14560.0 |
| tpr repeat-containing protein 08 | KARP_00341 | Not Available | Positive | 318286 - 318423 | 5232.56 |
| conjugal transfer protein trad | KARP_00342 | Not Available | Positive | 318754 - 318975 | 8636.19 |
| transposase | KARP_00343 | Not Available | Negative | 319083 - 319985 | 34959.6 |
| Putative guanosine polyphosphate pyrophospho hydrolase/synthetase | KARP_00344 | O67012 | Negative | 320104 - 320682 | 22646.6 |
| Replicative dna helicase | KARP_00345 | Q9ZD08 | Negative | 320916 - 321062 | 5525.58 |
| Putative dna polymerase iii delta prime subunit | KARP_00346 | Q4UL62 | Negative | 321020 - 321247 | 8667.37 |
| conjugal transfer protein traa | KARP_00347 | Q44349 | Positive | 321440 - 322210 | 29302.8 |
| conjugal transfer protein traa | KARP_00348 | Not Available | Positive | 322289 - 322477 | 7016.41 |
| integrase | KARP_00349 | Not Available | Negative | 322663 - 322854 | 7802.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
