Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q6FZY1 | Positive | 2449276 - 2449599 | 11813.1 |
| hypothetical protein | - | Q1RKE6 | Positive | 2449603 - 2450568 | 35873.9 |
| hypothetical protein | - | Q9ZCG1 | Positive | 2450580 - 2451440 | 32346.1 |
| hypothetical protein | - | Q4UK26 | Positive | 2451509 - 2452075 | 21366.2 |
| hypothetical protein | - | Q1RKE5 | Positive | 2452039 - 2453007 | 35177.7 |
| hypothetical protein | - | B3CUJ6 | Positive | 2453052 - 2454488 | 52750.7 |
| hypothetical protein | - | B3CUJ5 | Positive | 2454819 - 2455484 | 25469.7 |
| hypothetical protein | - | B3CUJ5 | Positive | 2455484 - 2455939 | 17678.5 |
| hypothetical protein | - | Q1RGP0 | Positive | 2456159 - 2458042 | 69070.4 |
| hypothetical protein | - | Q4UM12 | Positive | 2458100 - 2458612 | 19075.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
