Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Positive | 145919 - 146131 | 8357.93 |
| hypothetical protein | - | Not Available | Positive | 146155 - 146646 | 18741.8 |
| hypothetical protein | - | Not Available | Positive | 146668 - 146964 | 11479.0 |
| hypothetical protein | - | Q8D5Z6 | Positive | 147157 - 147525 | 13897.9 |
| hypothetical protein | - | Q2YN11 | Positive | 147626 - 148201 | 22683.1 |
| hypothetical protein | - | Not Available | Positive | 148323 - 149273 | 36567.7 |
| hypothetical protein | - | Not Available | Negative | 149341 - 149787 | 17157.0 |
| hypothetical protein | - | Not Available | Positive | 150072 - 150344 | 10571.8 |
| hypothetical protein | - | Q44363 | Positive | 150338 - 151381 | 39664.8 |
| hypothetical protein | - | Q44349 | Positive | 151366 - 152514 | 43663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
