Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | B3CSG3 | Negative | 2074138 - 2075403 | 45107.6 |
| hypothetical protein | - | Not Available | Positive | 2076215 - 2076910 | 25322.6 |
| Trna-leu | Not Available | Not Available | Positive | 2077045 - 2077130 | Not Available |
| hypothetical protein | - | Not Available | Positive | 2077775 - 2077900 | 4752.63 |
| hypothetical protein | - | Not Available | Negative | 2078180 - 2078332 | 5713.92 |
| hypothetical protein | - | O34437 | Negative | 2078611 - 2079192 | 22137.9 |
| hypothetical protein | - | Not Available | Negative | 2079327 - 2079458 | 5172.58 |
| hypothetical protein | - | Q00462 | Negative | 2079906 - 2080034 | 5104.36 |
| hypothetical protein | - | Q00462 | Negative | 2080082 - 2080279 | 7559.42 |
| hypothetical protein | - | Q00462 | Negative | 2080291 - 2080728 | 17104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
