Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 2001769 - 2003619 | 69499.8 |
| hypothetical protein | - | Q9ZDU9 | Negative | 2003621 - 2004184 | 21234.8 |
| hypothetical protein | - | Q8G0Y6 | Negative | 2004235 - 2004849 | 23826.0 |
| hypothetical protein | - | Q8G0Y6 | Negative | 2004897 - 2005607 | 27077.3 |
| Trna-cys | Not Available | Not Available | Positive | 2005805 - 2005879 | Not Available |
| hypothetical protein | - | Q9ZDG8 | Positive | 2005951 - 2006625 | 25927.9 |
| hypothetical protein | - | Q1RHT1 | Positive | 2006622 - 2006879 | 9494.5 |
| hypothetical protein | - | Not Available | Positive | 2007214 - 2007690 | 18011.7 |
| hypothetical protein | - | Q9ZCJ8 | Negative | 2007685 - 2008407 | 27351.6 |
| hypothetical protein | - | Q1RH95 | Positive | 2008647 - 2009132 | 18066.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
