Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | B3CQP5 | Negative | 1993657 - 1994565 | 34131.1 |
| hypothetical protein | - | Q55682 | Negative | 1994689 - 1995483 | 29120.5 |
| hypothetical protein | - | B3CQP3 | Negative | 1995503 - 1995964 | 17932.9 |
| hypothetical protein | - | Q1RIJ3 | Negative | 1995967 - 1996863 | 32833.3 |
| hypothetical protein | - | Q1RIJ2 | Negative | 1996844 - 1997119 | 10395.5 |
| hypothetical protein | - | Q1RIJ2 | Negative | 1997131 - 1997745 | 23490.5 |
| hypothetical protein | - | O34481 | Negative | 1998441 - 2000078 | 60098.3 |
| hypothetical protein | - | O34481 | Negative | 2000087 - 2000560 | 16912.8 |
| hypothetical protein | - | B3CQN9 | Negative | 2000587 - 2000961 | 14319.6 |
| hypothetical protein | - | A8GM73 | Negative | 2000958 - 2001722 | 28816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
