Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | B3CST6 | Positive | 1988555 - 1988827 | 10165.6 |
| hypothetical protein | - | A5CD00 | Positive | 1988857 - 1989375 | 19194.9 |
| hypothetical protein | - | B3CST6 | Positive | 1989344 - 1990324 | 37251.9 |
| hypothetical protein | - | Q92JH1 | Positive | 1990336 - 1991091 | 28860.2 |
| hypothetical protein | - | Not Available | Negative | 1991385 - 1991519 | 5363.75 |
| hypothetical protein | - | Not Available | Negative | 1991497 - 1991802 | 11606.3 |
| hypothetical protein | - | O05946 | Negative | 1992591 - 1992713 | 4480.5 |
| hypothetical protein | - | O05946 | Negative | 1992839 - 1993207 | 14331.4 |
| hypothetical protein | - | Q9ZDZ7 | Negative | 1993191 - 1993439 | 9384.59 |
| hypothetical protein | - | Q9ZDZ7 | Negative | 1993499 - 1993636 | 5253.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
