Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | A8F005 | Positive | 1980480 - 1981370 | 33472.0 |
| hypothetical protein | - | Not Available | Negative | 1981381 - 1981662 | 11069.5 |
| hypothetical protein | - | Not Available | Negative | 1981788 - 1982012 | 8781.11 |
| hypothetical protein | - | Not Available | Negative | 1982014 - 1982298 | 11036.3 |
| hypothetical protein | - | Q9ZCA5 | Negative | 1982466 - 1983146 | 26489.6 |
| hypothetical protein | - | Not Available | Negative | 1983328 - 1983624 | 11155.9 |
| hypothetical protein | - | B3CST3 | Positive | 1983757 - 1984044 | 10783.8 |
| hypothetical protein | - | B3CST3 | Positive | 1984038 - 1986422 | 89924.3 |
| hypothetical protein | - | A5CD02 | Positive | 1986587 - 1988044 | 54914.6 |
| hypothetical protein | - | Q9ZE83 | Negative | 1988045 - 1988389 | 12741.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
