Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1909306 - 1909518 | 8386.93 |
| hypothetical protein | - | Not Available | Negative | 1909943 - 1910584 | 25514.6 |
| hypothetical protein | - | Not Available | Negative | 1911478 - 1912008 | 19594.7 |
| hypothetical protein | - | P46530 | Negative | 1912028 - 1912657 | 23476.8 |
| hypothetical protein | - | Q4UL62 | Negative | 1912894 - 1913601 | 26923.0 |
| hypothetical protein | - | Q1RI04 | Negative | 1913601 - 1914329 | 26444.3 |
| hypothetical protein | - | Not Available | Negative | 1914338 - 1915312 | 37577.8 |
| hypothetical protein | - | Not Available | Negative | 1915472 - 1916014 | 21253.2 |
| hypothetical protein | - | Not Available | Negative | 1916223 - 1916405 | 6899.21 |
| hypothetical protein | - | Not Available | Negative | 1916514 - 1916705 | 6634.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
