Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q44363 | Negative | 1896791 - 1897561 | 28628.5 |
| hypothetical protein | - | Q44349 | Negative | 1897828 - 1898976 | 43629.4 |
| hypothetical protein | - | Q44363 | Negative | 1898961 - 1900253 | 49433.3 |
| hypothetical protein | - | Not Available | Positive | 1900547 - 1900903 | 13635.9 |
| hypothetical protein | - | Q15Q25 | Positive | 1901421 - 1902815 | 52657.5 |
| hypothetical protein | - | Not Available | Positive | 1902865 - 1903557 | 26653.8 |
| hypothetical protein | - | Not Available | Positive | 1905928 - 1906551 | 24723.2 |
| hypothetical protein | - | Q2YN11 | Negative | 1907236 - 1907811 | 22743.5 |
| hypothetical protein | - | Q8D5Z6 | Negative | 1907912 - 1908769 | 33212.5 |
| hypothetical protein | - | Q54YH4 | Negative | 1908791 - 1909189 | 15069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
