Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1846033 - 1846329 | 10711.7 |
| hypothetical protein | - | P04890 | Negative | 1846421 - 1847077 | 24734.8 |
| hypothetical protein | - | Not Available | Negative | 1847393 - 1847761 | 14376.9 |
| hypothetical protein | - | Q9ZD08 | Positive | 1848266 - 1848412 | 5449.48 |
| hypothetical protein | - | O67012 | Positive | 1848646 - 1848966 | 12489.8 |
| hypothetical protein | - | Q00462 | Negative | 1849843 - 1849971 | 5129.4 |
| hypothetical protein | - | Q00462 | Negative | 1850019 - 1850216 | 7559.42 |
| hypothetical protein | - | Q00462 | Negative | 1850228 - 1850584 | 13880.9 |
| hypothetical protein | - | Q92HR1 | Negative | 1851179 - 1851595 | 15812.1 |
| hypothetical protein | - | Q1RIE3 | Negative | 1851592 - 1852185 | 22129.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
