Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1791357 - 1791491 | 4985.24 |
| hypothetical protein | - | Not Available | Positive | 1791692 - 1792558 | 31406.8 |
| hypothetical protein | - | Not Available | Negative | 1792628 - 1792798 | 6629.01 |
| hypothetical protein | - | Not Available | Negative | 1792891 - 1793085 | 7615.88 |
| hypothetical protein | - | P24200 | Negative | 1793294 - 1793911 | 24747.1 |
| hypothetical protein | - | P19593 | Negative | 1793875 - 1795008 | 43313.9 |
| hypothetical protein | - | Q44363 | Positive | 1795688 - 1798507 | 107399.0 |
| hypothetical protein | - | Q44363 | Positive | 1799026 - 1799925 | 33631.9 |
| hypothetical protein | - | Not Available | Negative | 1799939 - 1800145 | 8005.96 |
| hypothetical protein | - | Not Available | Negative | 1800151 - 1800276 | 4552.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
