Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | O05965 | Positive | 100127 - 100762 | 24261.3 |
| hypothetical protein | - | C3PMG3 | Positive | 100878 - 101624 | 28175.4 |
| hypothetical protein | - | Not Available | Positive | 102644 - 103315 | 26612.7 |
| hypothetical protein | - | Not Available | Positive | 103403 - 104203 | 30772.9 |
| hypothetical protein | - | Q68WJ2 | Positive | 104212 - 105648 | 53460.2 |
| hypothetical protein | - | P46530 | Positive | 105885 - 106514 | 23476.8 |
| hypothetical protein | - | Not Available | Positive | 106534 - 107064 | 19594.7 |
| hypothetical protein | - | Not Available | Positive | 107745 - 107957 | 8382.03 |
| hypothetical protein | - | P35164 | Positive | 107981 - 108526 | 21102.9 |
| hypothetical protein | - | Q2YN11 | Positive | 108627 - 109205 | 22887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
