Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q92J81 | Negative | 1707973 - 1708800 | 32049.6 |
| hypothetical protein | - | Q9ZE16 | Negative | 1708800 - 1709951 | 43605.9 |
| hypothetical protein | - | Not Available | Negative | 1710402 - 1710947 | 20599.0 |
| hypothetical protein | - | O52177 | Negative | 1710944 - 1714663 | 143046.0 |
| hypothetical protein | - | P44443 | Positive | 1715434 - 1717080 | 61810.8 |
| hypothetical protein | - | Not Available | Positive | 1717077 - 1717460 | 14108.6 |
| hypothetical protein | - | Not Available | Positive | 1718306 - 1719184 | 34503.0 |
| hypothetical protein | - | Not Available | Positive | 1719294 - 1721012 | 66908.0 |
| hypothetical protein | - | Q1RI04 | Positive | 1721021 - 1721749 | 26495.4 |
| hypothetical protein | - | Q9ZD08 | Positive | 1721749 - 1722456 | 26870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
