Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 1695848 - 1695922 | Not Available |
| hypothetical protein | - | Q1RJB3 | Positive | 1696446 - 1698023 | 60193.3 |
| hypothetical protein | - | Q9ZCY9 | Positive | 1698164 - 1699633 | 54792.5 |
| hypothetical protein | - | Not Available | Positive | 1699670 - 1700530 | 32785.9 |
| hypothetical protein | - | Not Available | Positive | 1700545 - 1701501 | 35734.6 |
| hypothetical protein | - | O90760 | Negative | 1703371 - 1704639 | 47662.8 |
| hypothetical protein | - | Q70AN6 | Negative | 1705263 - 1706114 | 31572.2 |
| hypothetical protein | - | A0A0H3C7V4 | Negative | 1706121 - 1707185 | 38141.5 |
| hypothetical protein | - | Q92HK7 | Negative | 1707286 - 1707564 | 10081.7 |
| hypothetical protein | - | Q1RJT3 | Negative | 1707539 - 1707853 | 11852.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
