Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1642377 - 1642943 | 22375.1 |
| hypothetical protein | - | Not Available | Negative | 1643191 - 1643718 | 20583.2 |
| hypothetical protein | - | Not Available | Negative | 1643792 - 1644313 | 20474.8 |
| hypothetical protein | - | P19593 | Positive | 1644944 - 1646077 | 43244.8 |
| hypothetical protein | - | P24200 | Positive | 1646041 - 1646658 | 24747.1 |
| hypothetical protein | - | Not Available | Positive | 1646867 - 1647322 | 17379.3 |
| hypothetical protein | - | Not Available | Negative | 1647392 - 1648402 | 38546.2 |
| hypothetical protein | - | Q2YN11 | Negative | 1648524 - 1649099 | 22682.1 |
| hypothetical protein | - | Q8D5Z6 | Negative | 1649200 - 1650057 | 33289.6 |
| hypothetical protein | - | P23545 | Negative | 1650032 - 1650478 | 17003.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
