Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1597784 - 1597996 | 8322.91 |
| hypothetical protein | - | Q58015 | Positive | 1598363 - 1599172 | 31662.7 |
| hypothetical protein | - | Not Available | Negative | 1599176 - 1599709 | 19688.8 |
| hypothetical protein | - | Q5UQV3 | Negative | 1599729 - 1600373 | 24058.8 |
| hypothetical protein | - | O67012 | Negative | 1600408 - 1600980 | 22574.3 |
| hypothetical protein | - | Q92HG8 | Negative | 1601213 - 1602655 | 53749.5 |
| hypothetical protein | - | Not Available | Negative | 1602664 - 1603404 | 28223.5 |
| hypothetical protein | - | Not Available | Positive | 1603871 - 1604404 | 20774.5 |
| hypothetical protein | - | Not Available | Positive | 1604482 - 1605579 | 42423.0 |
| hypothetical protein | - | Q68WJ2 | Positive | 1605588 - 1607024 | 53475.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
