Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | O31608 | Negative | 1423395 - 1424768 | 52618.8 |
| hypothetical protein | - | Not Available | Negative | 1424789 - 1425391 | 23366.2 |
| hypothetical protein | - | P71019 | Positive | 1425433 - 1426371 | 34108.0 |
| hypothetical protein | - | C3PNE3 | Positive | 1427193 - 1428227 | 39785.2 |
| hypothetical protein | - | Q1RIS8 | Positive | 1428224 - 1430662 | 90467.4 |
| hypothetical protein | - | A5CE05 | Negative | 1430748 - 1431677 | 33477.6 |
| hypothetical protein | - | A5CE04 | Negative | 1431674 - 1432114 | 16281.9 |
| hypothetical protein | - | A5CE04 | Negative | 1432162 - 1432548 | 14757.6 |
| hypothetical protein | - | Not Available | Negative | 1432874 - 1433317 | 16871.7 |
| hypothetical protein | - | P65442 | Negative | 1433392 - 1433724 | 12348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
