Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1354927 - 1355460 | 20663.3 |
| hypothetical protein | - | Q5UQV3 | Negative | 1355576 - 1357162 | 59666.7 |
| hypothetical protein | - | Not Available | Negative | 1357230 - 1357343 | 4349.32 |
| hypothetical protein | - | Not Available | Negative | 1357611 - 1358924 | 50026.9 |
| hypothetical protein | - | P18473 | Negative | 1358921 - 1359256 | 12610.4 |
| hypothetical protein | - | P18471 | Negative | 1359325 - 1360269 | 34604.3 |
| hypothetical protein | - | Not Available | Negative | 1360303 - 1360476 | 6582.16 |
| hypothetical protein | - | P18472 | Negative | 1360567 - 1361226 | 24508.1 |
| hypothetical protein | - | P18004 | Negative | 1361223 - 1363715 | 92890.6 |
| hypothetical protein | - | Not Available | Negative | 1363696 - 1364025 | 12573.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
