Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q1RI04 | Positive | 1328999 - 1329727 | 26444.3 |
| hypothetical protein | - | Q4UL62 | Positive | 1329727 - 1330434 | 26849.9 |
| hypothetical protein | - | O67012 | Positive | 1330669 - 1331241 | 22578.3 |
| hypothetical protein | - | Q5UQV3 | Positive | 1331276 - 1331920 | 24112.8 |
| hypothetical protein | - | Not Available | Positive | 1331968 - 1332471 | 18530.2 |
| hypothetical protein | - | Q58015 | Negative | 1332475 - 1333284 | 31635.7 |
| hypothetical protein | - | Not Available | Positive | 1333651 - 1333929 | 10422.7 |
| hypothetical protein | - | Q54YZ9 | Positive | 1333994 - 1334695 | 26246.6 |
| hypothetical protein | - | Q5A599 | Positive | 1334825 - 1335403 | 21735.4 |
| hypothetical protein | - | Q54YZ9 | Positive | 1335554 - 1336357 | 30694.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
