Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Not Available | Negative | 1315632 - 1315787 | 5862.04 |
| hypothetical protein | - | Not Available | Negative | 1315880 - 1316035 | 5418.67 |
| hypothetical protein | - | Not Available | Negative | 1316063 - 1316320 | 9226.21 |
| hypothetical protein | - | Not Available | Negative | 1316296 - 1316532 | 8938.82 |
| hypothetical protein | - | B3CRU7 | Negative | 1317598 - 1318677 | 40723.6 |
| hypothetical protein | - | Not Available | Negative | 1319674 - 1319898 | 8597.47 |
| hypothetical protein | - | Not Available | Positive | 1319974 - 1320180 | 7776.87 |
| hypothetical protein | - | Not Available | Positive | 1320180 - 1320572 | 14805.0 |
| hypothetical protein | - | Q00462 | Positive | 1320855 - 1321292 | 17042.9 |
| hypothetical protein | - | Q00462 | Positive | 1321304 - 1321501 | 7559.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
