Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | P24082 | Positive | 1307635 - 1309326 | 64642.1 |
| hypothetical protein | - | Not Available | Positive | 1309338 - 1310021 | 26153.8 |
| hypothetical protein | - | P15069 | Positive | 1310018 - 1310911 | 32711.2 |
| hypothetical protein | - | Not Available | Positive | 1311038 - 1311334 | 11018.7 |
| hypothetical protein | - | P20665 | Positive | 1311511 - 1312245 | 27422.3 |
| hypothetical protein | - | P20665 | Positive | 1312287 - 1312472 | 6954.9 |
| hypothetical protein | - | Not Available | Positive | 1312555 - 1313193 | 24267.4 |
| hypothetical protein | - | Not Available | Positive | 1313316 - 1313732 | 16266.6 |
| hypothetical protein | - | P04043 | Positive | 1314025 - 1314381 | 14105.8 |
| hypothetical protein | - | Q03441 | Negative | 1314414 - 1315283 | 33792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
