Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | Q68WW9 | Positive | 1258501 - 1258668 | 6262.24 |
| hypothetical protein | - | B8H092 | Positive | 1258675 - 1259070 | 14945.7 |
| hypothetical protein | - | B8H092 | Positive | 1259070 - 1259801 | 26366.1 |
| hypothetical protein | - | A5CEL6 | Positive | 1259805 - 1260578 | 28747.6 |
| hypothetical protein | - | Q00462 | Negative | 1262671 - 1262799 | 5120.41 |
| hypothetical protein | - | Q00462 | Negative | 1262843 - 1263043 | 7923.77 |
| hypothetical protein | - | Not Available | Negative | 1263055 - 1263159 | 4007.86 |
| hypothetical protein | - | Q4UK84 | Negative | 1263758 - 1264972 | 44487.4 |
| hypothetical protein | - | Not Available | Negative | 1265253 - 1265744 | 19313.6 |
| hypothetical protein | - | O65272 | Negative | 1265731 - 1267473 | 62863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
