Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rickettsiales
Family
Rickettsiaceae
Genus
Orientia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rickettsiales |
| Family | Rickettsiaceae |
| Genus | Orientia |
| Species | Orientia tsutsugamushi |
| Strain | Karp |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
853497 bp
Thymine Count
855674 bp
Guanine Count
377721 bp
Cytosine Count
381814 bp
Genome Length
2468706 bp
Protein-coding Genes
2771 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | - | B3CQT9 | Positive | 1181615 - 1182343 | 26991.6 |
| hypothetical protein | - | A5CDC6 | Positive | 1182399 - 1182623 | 7716.75 |
| hypothetical protein | - | Q4FPE7 | Positive | 1182631 - 1183128 | 19775.0 |
| hypothetical protein | - | Not Available | Positive | 1183141 - 1183308 | 6407.07 |
| hypothetical protein | - | Not Available | Positive | 1183969 - 1184358 | 15220.9 |
| hypothetical protein | - | Q00462 | Positive | 1184631 - 1184987 | 13827.8 |
| hypothetical protein | - | Q00462 | Positive | 1184999 - 1185373 | 14511.8 |
| hypothetical protein | - | Q1RK79 | Negative | 1185654 - 1187627 | 73170.5 |
| hypothetical protein | - | Q68VS6 | Negative | 1187602 - 1187940 | 12741.7 |
| hypothetical protein | - | Q92JH8 | Negative | 1188027 - 1188398 | 14357.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scrub typhus | Causes | PMC11039911 |
| Scrub typhus | Causes | PMC13464350 |
| Scrub typhus | Causes | PMC6005640 |
| Scrub typhus | Causes | PMC8460164 |
